Large-Scale Semantic Indexing of Biomedical Publications at BioASQ

G. Tsoumakas, M. Laliotis, N. Markantonatos, I. Vlahavas, “Large-Scale Semantic Indexing of Biomedical Publications at BioASQ”, BioASQ Workshop, Valencia, Spain, September 27, 2013, 2013.

Automated annotation of scientific publications in real-world digital libraries requires dealing with challenges such as large number of concepts and training examples, multi-label training examples and hierarchical structure of concepts. BioASQ is a European project that contributes a large-scale biomedical publications corpus for working on these challenges. This paper documents the participation of our team to the large-scale biomedical semantic indexing task of BioASQ.